.. _lectures:

Lecture notes
========================================

Biology
----------------------------------------

- `Introduction to RNA-seq I <http://people.duke.edu/~ccc14/ngs-2015/_downloads/Intro_to_RNAseq.pptx>`_

Experimental Design
----------------------------------------

- `Experimental Design I <http://people.duke.edu/~ccc14/ngs-2015/_downloads/ExpDesign_Part_I.7.13.15.pdf>`_

- `Experimental Design II <http://people.duke.edu/~ccc14/ngs-2015/_downloads/ExpDesign_PartII.7.22.15.pdf>`_

Statistical Inference
----------------------------------------

- `Statistics for Weeks 1-2 <http://people.duke.edu/~ccc14/ngs-2015/_downloads/NGS-Statistics-Weeks-1and2.pdf>`_

- `Clustering exercise I <http://people.duke.edu/~ccc14/ngs-2015/_downloads/cluster-exercise.pdf>`_

Bioinformatics
----------------------------------------

- `Overview of Bioinfromatics for RNA-seqI <http://people.duke.edu/~ccc14/ngs-2015/_downloads/bioinformatics_overview.pdf>`_

- `Short Read Alignment Algorithms <http://people.duke.edu/~ccc14/ngs-2015/_downloads/ShortReadAlignment_08-04-2015.pdf>`_